STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85751.1Lipid A export ATP-binding/permease protein MsbA. (597 aa)    
Predicted Functional Partners:
AGI85750.1
Lipid A export ATP-binding/permease protein MsbA.
 
    
0.810
glyA
Serine hydroxymethyltransferase / H4MPt-dependent SHMT; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
 
  
 0.537
AGI85927.1
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
     
0.526
AGI86363.1
Cell division protein FtsH.
   
 0.519
AGI85505.2
Nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit.
 
     
0.492
AGI86193.1
ABC transporter, ATP-binding protein.
 
0.465
AGI85466.1
Hypothetical protein.
  
 
 0.459
AGI85043.1
ABC transporter, ATP-binding protein.
  
0.435
AGI85965.1
ABC transporter, ATP-binding protein.
  
 0.435
AGI85972.2
ABC transporter related protein.
  
0.435
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.