STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85818.1Hypothetical protein. (2373 aa)    
Predicted Functional Partners:
AGI85918.1
Hypothetical protein.
  
     0.616
AGI85215.1
Hypothetical protein.
  
     0.605
AGI84887.1
Hypothetical protein.
  
     0.595
AGI85819.1
Hypothetical protein.
      0.586
AGI85768.1
Hypothetical protein.
  
     0.575
AGI85817.1
Hypothetical protein.
       0.548
AGI85474.1
Hypothetical protein.
  
     0.533
AGI84945.1
Hypothetical protein.
  
     0.523
AGI85312.1
Hypothetical protein.
  
     0.486
AGI85766.1
Formate efflux transporter; TC 2.A.44 family.
  
     0.459
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.