STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85902.1tRNA (Guanine37-N1) -methyltransferase. (333 aa)    
Predicted Functional Partners:
dphB
Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
 
  
 0.909
AGI86257.1
Putative RNA-binding protein; COG1094.
  
    0.681
AGI84983.1
Eukaryotic translation initiation factor 5A.
  
     0.577
rpl4
LSU ribosomal protein L1e (L4p); Forms part of the polypeptide exit tunnel.
  
     0.576
AGI85904.1
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative.
       0.566
taw1
Fe-S Oxidoreductase Wyeosine biosynthesis; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
  
  
 0.564
AGI85635.1
Heat shock protein 60 family chaperone GroEL / Thermosome subunit; Belongs to the TCP-1 chaperonin family.
  
 
   0.539
AGI84985.1
rRNA biogenesis protein Nop5/Nop56.
  
    0.534
AGI86321.1
Heat shock protein 60 family chaperone GroEL / Thermosome subunit; Belongs to the TCP-1 chaperonin family.
  
 
   0.501
pelA
Putative cell division protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.
  
     0.500
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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