STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI86204.13-hexulose-6-phosphate isomerase (6- phospho-3-hexuloisomerase) (PHI). (178 aa)    
Predicted Functional Partners:
AGI86396.2
OMPdecase domain-containing protein; D-arabino-3-hexulose 6-phosphate formaldehyde lyase / Hypothetical protein with distant similarity to Ribonuclease E inhibitor RraA (former MenG).
 
 0.999
AGI84858.1
Glucose-6-phosphate isomerase, archaeal II / Mannose-6-phosphate isomerase, archaeal.
    
 0.919
AGI85272.1
Glucose-6-phosphate isomerase, archaeal II Mannose-6-phosphate isomerase, archaeal.
    
 0.919
AGI84936.1
Transketolase, N-terminal section.
     
  0.900
AGI84937.1
Transketolase, C-terminal section.
     
  0.900
fbp
Fructose-1,6-bisphosphatase, type V, archaeal; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
     
  0.900
AGI86203.1
Endonuclease IV.
       0.758
AGI84817.1
PfkB domain protein.
 
    0.590
AGI85208.2
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.467
rpl13
LSU ribosomal protein L13Ae (L13p); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.447
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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