STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000616095_00931Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000616095_00929
Unannotated protein.
  
  0.894
GCA_000616095_03654
Unannotated protein.
    
   0.865
GCA_000616095_00932
Unannotated protein.
    
  0.801
GCA_000616095_00930
Unannotated protein.
       0.773
GCA_000616095_00933
Unannotated protein.
       0.773
GCA_000616095_01695
Unannotated protein.
    
  0.764
GCA_000616095_02517
Unannotated protein.
 
      0.676
GCA_000616095_00741
Unannotated protein.
    
  0.659
GCA_000616095_00742
Unannotated protein.
    
  0.659
GCA_000616095_00743
Unannotated protein.
    
  0.659
Your Current Organism:
Sneathiella glossodoripedis
NCBI taxonomy Id: 1236958
Other names: S. glossodoripedis JCM 23214, Sneathiella glossodoripedis JCM 23214
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.