STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000616095_03047Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_000616095_00842
Unannotated protein.
  
 
 0.669
GCA_000616095_00591
Unannotated protein.
    
 0.656
GCA_000616095_01479
Unannotated protein.
    
  0.633
GCA_000616095_03126
Unannotated protein.
    
  0.633
GCA_000616095_01284
Unannotated protein.
    
  0.611
GCA_000616095_03603
Unannotated protein.
     
 0.605
GCA_000616095_03657
Unannotated protein.
     
 0.601
GCA_000616095_03658
Unannotated protein.
     
 0.601
GCA_000616095_01755
Unannotated protein.
     
 0.581
GCA_000616095_03659
Unannotated protein.
     
 0.581
Your Current Organism:
Sneathiella glossodoripedis
NCBI taxonomy Id: 1236958
Other names: S. glossodoripedis JCM 23214, Sneathiella glossodoripedis JCM 23214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.