STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000616095_03590Unannotated protein. (380 aa)    
Predicted Functional Partners:
GCA_000616095_03056
Unannotated protein.
    
 0.618
GCA_000616095_03421
Unannotated protein.
    
 0.618
GCA_000616095_03422
Unannotated protein.
    
 0.618
GCA_000616095_02985
Unannotated protein.
 
      0.561
GCA_000616095_03228
Unannotated protein.
  
     0.556
GCA_000616095_03591
Unannotated protein.
       0.503
GCA_000616095_03589
Unannotated protein.
       0.493
GCA_000616095_03588
Unannotated protein.
       0.475
GCA_000616095_03592
Unannotated protein.
       0.425
Your Current Organism:
Sneathiella glossodoripedis
NCBI taxonomy Id: 1236958
Other names: S. glossodoripedis JCM 23214, Sneathiella glossodoripedis JCM 23214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.