STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000616095_03600Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000616095_03601
Unannotated protein.
     0.962
GCA_000616095_03602
Unannotated protein.
       0.718
GCA_000616095_00513
Unannotated protein.
  
 
 0.639
GCA_000616095_02361
Unannotated protein.
    
 0.632
GCA_000616095_03561
Unannotated protein.
    
 0.628
GCA_000616095_02910
Unannotated protein.
  
 
 0.625
GCA_000616095_00830
Unannotated protein.
    
 0.622
GCA_000616095_03425
Unannotated protein.
    
 0.600
GCA_000616095_00512
Unannotated protein.
  
 
 0.587
GCA_000616095_00725
Unannotated protein.
   
 
 0.568
Your Current Organism:
Sneathiella glossodoripedis
NCBI taxonomy Id: 1236958
Other names: S. glossodoripedis JCM 23214, Sneathiella glossodoripedis JCM 23214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.