STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE31642.1Transcriptional regulator. (188 aa)    
Predicted Functional Partners:
GAE31644.1
Hypothetical protein.
 
     0.883
GAE31643.1
ABC-type multidrug transport system.
 
     0.868
GAE31640.1
ABC transporter.
 
     0.523
GAE31645.1
Hypothetical protein.
 
     0.508
GAE29461.1
Hypothetical protein.
  
     0.470
GAE30523.1
Hypothetical protein.
 
     0.449
GAE29458.1
Transcriptional regulator.
  
     0.436
GAE30521.1
ABC-type multidrug transport system.
 
     0.427
GAE29063.1
Multimodular transpeptidase-transglycosylase.
  
     0.413
GAE31639.1
Hypothetical protein.
 
     0.411
Your Current Organism:
Bacillus hemicellulosilyticus
NCBI taxonomy Id: 1236971
Other names: B. hemicellulosilyticus JCM 9152, Bacillus hemicellulosilyticus JCM 9152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.