STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE32801.1Spore germination protein GerKA. (454 aa)    
Predicted Functional Partners:
GAE32803.1
Spore germination protein.
 
  
 0.923
GAE32802.1
Hypothetical protein.
 
    0.812
GAE31002.1
Stage V sporulation protein AD.
  
    0.778
GAE31001.1
Stage V sporulation protein AC.
  
    0.777
GAE32001.1
Stage IV sporulation protein B.
  
     0.774
GAE28950.1
Stage V sporulation protein AD.
  
    0.773
GAE31003.1
Stage V sporulation protein AE.
  
    0.772
GAE28949.1
Stage V sporulation protein AC.
  
    0.772
GAE31751.1
Stage V sporulation protein T.
  
     0.772
GAE31889.1
Stage IV sporulation protein B.
  
     0.772
Your Current Organism:
Bacillus hemicellulosilyticus
NCBI taxonomy Id: 1236971
Other names: B. hemicellulosilyticus JCM 9152, Bacillus hemicellulosilyticus JCM 9152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.