STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE29138.1Prespore specific transcriptional activator RsfA. (186 aa)    
Predicted Functional Partners:
GAE31873.1
Stage III sporulation protein AH.
  
  
 0.778
GAE30838.1
Outer spore coat protein E.
  
     0.774
GAE32897.1
Spore germination protein GerD.
  
     0.774
GAE28894.1
Outer membrane lipoprotein receptor.
  
     0.773
GAE30294.1
Cell wall endopeptidase.
  
     0.771
GAE29768.1
Hypothetical protein; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
  
     0.770
GAE31849.1
Conserved protein YqhG.
  
     0.768
GAE32804.1
Spore cortex-lytic enzyme CwlJ.
  
     0.750
GAE29769.1
Spore cortex-lytic enzyme CwlJ.
  
     0.749
GAE31749.1
Fin: required for the switch from sigmaF to sigmaG during sporulation.
  
     0.749
Your Current Organism:
Bacillus hemicellulosilyticus
NCBI taxonomy Id: 1236971
Other names: B. hemicellulosilyticus JCM 9152, Bacillus hemicellulosilyticus JCM 9152
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.