STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAF06169.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
GAF09156.1
TPR repeat protein.
  
     0.749
GAF09105.1
Hypothetical protein.
  
     0.747
GAF07142.1
Hypothetical protein.
  
     0.746
GAF09077.1
Hypothetical protein.
  
     0.730
GAF06168.1
Alkyl hydroperoxide reductase.
       0.725
GAF08597.1
Cell division protein FtsI.
  
     0.722
GAF09753.1
Hypothetical protein.
  
     0.710
GAF06170.1
Sensor histidine kinase.
       0.708
GAF08270.1
Hypothetical protein.
  
     0.704
GAF06751.1
Hypothetical protein.
  
     0.700
Your Current Organism:
Paenibacillus pini
NCBI taxonomy Id: 1236976
Other names: P. pini JCM 16418, Paenibacillus pini JCM 16418, Paenibacillus pini S22, Paenibacillus sp. S22
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.