STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAF08316.1D-beta-hydroxybutyrate dehydrogenase. (258 aa)    
Predicted Functional Partners:
GAF07276.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.919
GAF06358.1
AMP-dependent synthetase and ligase.
  
 0.919
GAF06359.1
long-chain-fatty-acid-CoA ligase.
  
 0.919
GAF07307.1
long-chain-fatty-acid-CoA ligase.
  
 0.908
GAF07308.1
long-chain-fatty-acid-CoA ligase.
  
 0.908
GAF07309.1
long-chain-fatty-acid-CoA ligase.
  
 0.908
GAF07310.1
long-chain-fatty-acid-CoA ligase.
  
 0.908
GAF07319.1
long-chain-fatty-acid-CoA ligase.
  
 0.893
GAF07320.1
long-chain-fatty-acid-CoA ligase.
  
 0.893
GAF07321.1
long-chain-fatty-acid-CoA ligase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.893
Your Current Organism:
Paenibacillus pini
NCBI taxonomy Id: 1236976
Other names: P. pini JCM 16418, Paenibacillus pini JCM 16418, Paenibacillus pini S22, Paenibacillus sp. S22
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.