STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAF08319.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
GAF09264.1
Chitinase; Glycoside hydrolase family18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.973
GAF09308.1
Chitinase; Glycoside hydrolase family18.
 
 
 0.973
GAF09378.1
Chitinase; Glycoside hydrolase family18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.914
GAF07878.1
Chitinase; Glycoside hydrolase family18.
 
  
0.906
GAF07879.1
Chitinase; Glycoside hydrolase family18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.905
GAF08180.1
Chitinase; Glycoside hydrolase family18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.897
GAF10932.1
Chitinase; Glycoside hydrolase family18.
 
 
 0.891
GAF06982.1
Chitinase; Glycoside hydrolase family18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.883
GAF07640.1
Hypothetical protein.
 
  
 0.844
GAF08318.1
Chitin binding protein.
 
  
0.823
Your Current Organism:
Paenibacillus pini
NCBI taxonomy Id: 1236976
Other names: P. pini JCM 16418, Paenibacillus pini JCM 16418, Paenibacillus pini S22, Paenibacillus sp. S22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.