STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_00418Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_001310955_00417
Unannotated protein.
 
  
 0.873
GCA_001310955_00419
Unannotated protein.
 
     0.837
GCA_001310955_01338
Unannotated protein.
  
 
 
 0.833
GCA_001310955_00420
Unannotated protein.
 
     0.794
GCA_001310955_00422
Unannotated protein.
  
    0.722
GCA_001310955_00421
Unannotated protein.
       0.719
GCA_001310955_03822
Unannotated protein.
  
     0.676
GCA_001310955_00728
Unannotated protein.
  
     0.669
GCA_001310955_00964
Unannotated protein.
 
 
 0.651
GCA_001310955_00357
Unannotated protein.
  
   
 0.617
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.