STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_02527Unannotated protein. (234 aa)    
Predicted Functional Partners:
GCA_001310955_01918
Unannotated protein.
  
 
 0.875
GCA_001310955_01917
Unannotated protein.
  
 
 0.856
GCA_001310955_01404
Unannotated protein.
  
 
 0.794
GCA_001310955_03104
Unannotated protein.
  
 
 0.794
GCA_001310955_04083
Unannotated protein.
  
 
 0.794
GCA_001310955_00186
Unannotated protein.
 
 
 
 0.783
GCA_001310955_00698
Unannotated protein.
  
   0.773
GCA_001310955_04168
Unannotated protein.
  
     0.766
GCA_001310955_00964
Unannotated protein.
 
 
 
 0.734
GCA_001310955_01915
Unannotated protein.
 
 
 0.734
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.