STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_03781Unannotated protein. (189 aa)    
Predicted Functional Partners:
GCA_001310955_00829
Unannotated protein.
    
  0.785
GCA_001310955_03782
Unannotated protein.
       0.773
GCA_001310955_01060
Unannotated protein.
  
     0.764
GCA_001310955_01354
Unannotated protein.
  
     0.752
GCA_001310955_03079
Unannotated protein.
   
 
 0.725
GCA_001310955_00185
Unannotated protein.
  
  
  0.664
GCA_001310955_01230
Unannotated protein.
    
  0.655
GCA_001310955_02437
Unannotated protein.
    
  0.655
GCA_001310955_00173
Unannotated protein.
    
  0.608
GCA_001310955_04132
Unannotated protein.
    
  0.608
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.