STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAO30671.1Phytochrome-like protein. (520 aa)    
Predicted Functional Partners:
GAO30670.1
Phosphate regulon transcriptional regulatory protein PhoB.
  0.982
GAO30594.1
Sensory box histidine kinase/response regulator.
 
 0.949
GAO28896.1
Hypothetical protein.
 
0.941
GAO31302.1
Histidine kinase.
 
 0.938
GAO30678.1
Two-component hybrid sensor and regulator.
 0.917
GAO29990.1
Sensory box histidine kinase/response regulator.
 
 0.913
GAO28342.1
Response regulator receiver.
  
  0.909
GAO29814.1
Hypothetical protein.
 
0.908
GAO30595.1
Sensory box histidine kinase/response regulator.
 
0.907
GAO30043.1
Hypothetical protein.
 
0.905
Your Current Organism:
Geofilum rubicundum
NCBI taxonomy Id: 1236989
Other names: G. rubicundum JCM 15548, Geofilum rubicundum JAM-BA0501, Geofilum rubicundum JCM 15548, Rikenellaceae bacterium JAM-BA0501, Rikenellaceae bacterium NCIMB 14482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.