STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_00880TonB-dependent receptor. (668 aa)    
Predicted Functional Partners:
C900_01678
Long-chain-fatty-acid--CoA ligase.
  
  
 0.657
C900_03088
Putative transmembrane protein.
  
     0.606
C900_00063
Putative transmembrane protein.
  
     0.600
C900_01497
Hypothetical protein.
  
     0.590
C900_00151
Putative transmembrane protein.
  
     0.583
C900_00605
Hypothetical protein.
  
     0.571
C900_00469
Hypothetical protein.
  
     0.549
C900_01076
Hypothetical protein.
  
     0.544
C900_01077
Hypothetical protein.
  
     0.539
C900_01075
Hypothetical protein.
  
     0.516
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.