STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01023(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase. (293 aa)    
Predicted Functional Partners:
C900_04458
Geranylgeranylglyceryl phosphate synthase.
 
  
 0.966
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.799
C900_01806
Putative Fe-S oxidoreductase, SAM radical superfamily.
  
  
  0.691
C900_02730
Hypothetical protein.
 
     0.637
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.636
C900_01598
Hypothetical protein.
  
     0.603
C900_04887
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.593
C900_02106
Dimethylallyltransferase; Belongs to the FPP/GGPP synthase family.
 
 
 0.591
C900_01142
ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member.
  
     0.584
C900_00993
Hypothetical protein; Belongs to the ClpS family.
  
     0.583
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.