STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01188Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. (232 aa)    
Predicted Functional Partners:
C900_01187
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
 0.999
C900_04651
Enoyl-CoA hydratase.
  
 
 0.939
C900_01378
Hydroxymethylglutaryl-CoA lyase.
 
 
 0.913
C900_03120
3-hydroxybutyryl-CoA dehydrogenase.
 
 
 0.879
C900_05818
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.878
C900_04650
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.830
C900_01927
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.792
C900_01203
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.789
C900_00322
Hypothetical protein.
  
 
 0.785
C900_01096
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.766
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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