STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01307Hypothetical protein. (872 aa)    
Predicted Functional Partners:
C900_04092
Putative RND efflux membrane fusion protein.
 
   0.855
C900_04091
Putative ABC transport system, ATP-binding protein.
  
   0.849
C900_04080
ABC transporter, ATP-binding protein.
  
   0.820
C900_01308
Transcriptional regulator, PadR family.
 
     0.799
C900_01306
Hypothetical protein.
       0.773
C900_00659
Two-component system sensor histidine kinase.
  
     0.771
C900_01526
Hypothetical protein.
  
     0.771
C900_04036
Two-component system sensor histidine kinase.
  
     0.770
C900_00080
Response regulator receiver domain protein.
  
     0.769
C900_04094
Sensor histidine kinase involved in nitrogen fixation and metabolism regulation.
  
     0.769
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.