STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01511Putative glycosyltransferase protein. (394 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.781
C900_01513
Hypothetical protein.
       0.773
C900_01514
RNA polymerase sigma-70 factor, ECF subfamily.
       0.773
C900_03110
Sorbitol dehydrogenase.
 
  
 0.700
C900_03596
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
    0.684
C900_00620
Alpha,alpha-trehalose-phosphate synthase.
  
 0.661
C900_03108
Putative bi-domain oxidoreductase.
  
    0.620
C900_05813
Glycosyltransferase.
  
  
  0.598
C900_00163
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.582
C900_00162
Hypothetical protein.
  
    0.544
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.