STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01609Competence protein. (632 aa)    
Predicted Functional Partners:
C900_01409
Rossmann fold nucleotide-binding protein Smf.
 
  
 0.916
C900_03433
Competence protein F.
 
  
 0.884
C900_03967
ComM-related protein.
 
  
 0.794
C900_01608
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.768
C900_01612
Sensor histidine kinase/response regulator fusion protein.
  
    0.671
C900_04683
Hypothetical protein.
  
    0.647
C900_00257
Multi-sensor Hybrid Histidine Kinase.
  
    0.643
C900_01630
Hypothetical protein.
 
  
 0.603
C900_02111
Hypothetical protein; Belongs to the UPF0102 family.
  
    0.602
C900_05506
Hypothetical protein.
 
  
 0.587
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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