STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01711Rifampin ADP-ribosyl transferase. (147 aa)    
Predicted Functional Partners:
C900_03577
Putative acetyltransferase.
 
      0.823
C900_01710
Transcriptional regulator, MarR family.
       0.758
C900_01769
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
    
  0.607
C900_03343
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
    
  0.607
C900_04789
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
    
  0.607
C900_01709
Mobile element protein.
       0.510
C900_01712
NAD(P)H dehydrogenase (quinone).
       0.449
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.