STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01828Hypothetical protein. (1579 aa)    
Predicted Functional Partners:
C900_01824
VgrG protein.
 
 
   0.999
C900_01827
Hypothetical protein.
 
 
 
 0.993
C900_01826
GPW/gp25 family protein.
 
 
   0.992
C900_01823
Hypothetical protein.
 
   0.991
C900_01820
Hypothetical protein.
 
 
 
 0.978
C900_01821
Hypothetical protein.
 
 
 
 0.978
C900_02999
Hypothetical protein.
 
   0.971
C900_03003
Hypothetical protein.
 
 
 
 0.970
C900_03002
GPW/gp25 family protein.
 
 
   0.966
C900_03000
VgrG protein.
 
 
   0.962
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.