STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_02371Dihydroflavonol-4-reductase. (325 aa)    
Predicted Functional Partners:
C900_00322
Hypothetical protein.
  
 0.895
C900_01919
Malonyl CoA-acyl carrier protein transacylase.
  
 0.879
C900_01925
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
  
 0.879
C900_05790
Long-chain-fatty-acid--CoA ligase.
    
 0.843
C900_02369
Putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region.
  
  
 0.796
C900_02370
Capsular polysaccharide biosynthesis protein.
  
    0.796
C900_02368
Polysaccharide export protein.
  
    0.785
C900_01765
Glutamate synthase [NADPH] large chain.
    
  0.775
C900_00135
Malonyl CoA-acyl carrier protein transacylase.
  
 0.761
C900_02367
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.713
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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