STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_02542Hypothetical protein. (426 aa)    
Predicted Functional Partners:
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.773
C900_00620
Alpha,alpha-trehalose-phosphate synthase.
 
 
 0.762
C900_04562
Sialic acid-specific 9-O-acetylesterase.
  
    0.676
C900_04897
Hypothetical protein.
  
     0.665
C900_01919
Malonyl CoA-acyl carrier protein transacylase.
  
 0.613
C900_01925
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
  
 0.613
C900_02540
tRNA-(ms(2)io(6)A)-hydroxylase.
 
     0.609
C900_05744
Heavy metal RND efflux outer membrane protein, CzcC family.
  
     0.581
C900_00322
Hypothetical protein.
   
 0.576
C900_04548
Hypothetical protein.
  
     0.556
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.