STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_02900Nitrite reductase [NAD(P)H] subunit. (442 aa)    
Predicted Functional Partners:
C900_02899
Iron-sulfur cluster-binding protein.
 
     0.950
C900_00534
Putative nitrite reductase.
   
 0.942
C900_02716
Nitrite reductase [NAD(P)H] small subunit.
 0.938
C900_01765
Glutamate synthase [NADPH] large chain.
    
 0.914
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.860
C900_00464
FAD dependent oxidoreductase.
   
 0.848
C900_00465
FAD dependent oxidoreductase.
   
 0.848
C900_05466
Ferredoxin--sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.795
C900_01810
Hypothetical protein.
   
 0.780
C900_05501
Oxidoreductase.
   
 0.780
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.