STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_02925Polysaccharide deacetylase. (262 aa)    
Predicted Functional Partners:
C900_02921
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.858
C900_02924
3-oxoacyl-(acyl-carrier-protein) synthase-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.858
C900_02922
Acyl carrier protein.
 
     0.835
C900_02920
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.803
C900_02923
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.796
C900_02917
Lysophospholipid acyltransferase.
 
     0.744
C900_02918
Hypothetical protein.
 
     0.689
C900_01981
Glycosyl transferase, group 2 family protein.
 
 
 
  0.671
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
     0.664
C900_02928
Hypothetical protein.
 
     0.654
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.