STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_03081Methyltransferase; TM1293. (218 aa)    
Predicted Functional Partners:
C900_00322
Hypothetical protein.
   
 0.891
C900_05790
Long-chain-fatty-acid--CoA ligase.
    
 0.848
C900_01919
Malonyl CoA-acyl carrier protein transacylase.
   
 0.799
C900_01925
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
   
 0.799
C900_02285
Long-chain-fatty-acid--CoA ligase.
  
 
 0.733
C900_01924
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
    
 0.674
C900_00135
Malonyl CoA-acyl carrier protein transacylase.
   
 0.661
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.657
C900_03082
Alcohol dehydrogenase.
 
     0.647
C900_01682
Long-chain-fatty-acid--CoA ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.633
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.