STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_03517TonB-dependent receptor. (823 aa)    
Predicted Functional Partners:
C900_03521
Pantothenate:Na+ symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.768
C900_01678
Long-chain-fatty-acid--CoA ligase.
  
  
 0.657
C900_04818
tolB protein precursor.
  
     0.618
C900_03519
Hydrolase, alpha/beta fold family protein.
  
     0.611
C900_01220
Hypothetical protein.
  
     0.609
C900_03613
Hypothetical protein.
  
 
   0.587
C900_00640
Hypothetical protein.
  
     0.569
C900_04161
Hypothetical protein.
  
     0.564
C900_03601
Hypothetical protein.
  
     0.522
C900_03612
Hypothetical protein.
  
     0.517
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.