STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_035683-deoxy-manno-octulosonate cytidylyltransferase. (254 aa)    
Predicted Functional Partners:
C900_03569
Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  0.989
C900_03570
Hypothetical protein.
 
  
 0.982
C900_03571
N-acetylneuraminate synthase.
  
 0.978
C900_03564
UDP-N-acetylglucosamine 4,6-dehydratase.
 
   
 0.945
C900_03565
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.941
C900_03583
N-acetylneuraminate synthase.
  
 0.876
C900_03567
Aldo/keto reductase family protein.
 
     0.852
C900_03566
Putative acetyltransferase.
 
 
  0.836
hemL
Glutamate-1-semialdehyde aminotransferase.
   
  0.816
C900_03572
Hypothetical protein.
       0.732
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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