STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04079Outer membrane efflux protein. (451 aa)    
Predicted Functional Partners:
C900_04078
Hypothetical protein.
       0.732
C900_04333
Macrolide-specific efflux protein MacA.
 
  0.695
C900_00017
Secretion protein HlyD, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.683
C900_01425
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.683
C900_03886
Multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.651
C900_03887
RND efflux system, inner membrane transporter CmeB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.645
C900_01637
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.634
C900_01424
RND multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.632
C900_04080
ABC transporter, ATP-binding protein.
   
   0.619
C900_00109
Putative integral membrane efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.614
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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