STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04115Hypothetical protein. (393 aa)    
Predicted Functional Partners:
C900_01854
ABC transporter; Belongs to the ABC transporter superfamily.
    
 0.637
C900_04114
Hypothetical protein.
       0.558
C900_04685
Two-component hybrid sensor and regulator.
     
 0.550
C900_04289
Tobe domain protein.
    
  0.488
C900_02041
4-alpha-glucanotransferase (amylomaltase).
  
  
 0.433
C900_02266
Glycogen phosphorylase.
  
  
 0.421
C900_05311
Histidine kinase.
     
 0.400
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.