STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04398Hypothetical protein. (815 aa)    
Predicted Functional Partners:
C900_02861
Membrane protein, putative.
  
     0.767
C900_01723
Putative outer membrane protein.
 
     0.704
C900_01088
Hypothetical protein.
  
     0.688
C900_00753
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase.
  
     0.653
C900_04861
Hypothetical protein.
  
     0.653
C900_02722
Outer membrane protein assembly factor YaeT precursor.
  
     0.649
C900_00006
Hypothetical protein.
  
     0.627
C900_05722
UDP-2,3-diacylglucosamine hydrolase.
 
     0.612
C900_03507
Ribosome hibernation protein YhbH.
  
     0.601
C900_04024
Outer membrane assembly lipoprotein YfiO.
 
     0.597
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.