STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04638Hypothetical protein. (176 aa)    
Predicted Functional Partners:
C900_04637
Hypothetical protein.
 
     0.952
C900_04639
RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.773
C900_02215
Hypothetical protein.
  
     0.705
C900_02031
Hypothetical protein.
  
     0.677
C900_01391
Hypothetical protein.
  
     0.666
C900_03443
Hypothetical protein.
  
     0.551
C900_04640
Hypothetical protein.
       0.536
C900_00774
Hypothetical protein.
  
     0.510
C900_03611
Hypothetical protein.
  
     0.494
C900_04809
Hypothetical protein.
  
     0.484
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.