STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04806N-acetylglucosaminyltransferase. (372 aa)    
Predicted Functional Partners:
C900_04807
Hypothetical protein.
 
     0.898
C900_04804
Polysaccharide deacetylase.
 
 
  0.797
C900_04803
Polysaccharide-forming b-glycosyltransferase-related protein.
 
    
0.740
C900_03963
Hypothetical protein.
  
     0.716
C900_00620
Alpha,alpha-trehalose-phosphate synthase.
  
 
 0.700
C900_04805
Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.655
C900_05946
Hypothetical protein.
  
     0.625
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.619
C900_01919
Malonyl CoA-acyl carrier protein transacylase.
  
 0.613
C900_01925
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
  
 0.613
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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