STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04807Hypothetical protein. (318 aa)    
Predicted Functional Partners:
C900_04806
N-acetylglucosaminyltransferase.
 
     0.898
C900_04804
Polysaccharide deacetylase.
 
     0.684
C900_04803
Polysaccharide-forming b-glycosyltransferase-related protein.
 
     0.662
C900_04805
Serine phosphatase RsbU, regulator of sigma subunit.
       0.651
C900_05946
Hypothetical protein.
  
     0.636
C900_01984
Hypothetical protein.
  
     0.621
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.619
C900_03673
N-acetylglucosaminyltransferase.
 
     0.597
C900_05471
Hypothetical protein.
  
     0.584
C900_01391
Hypothetical protein.
  
     0.577
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.