STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04810Hypothetical protein. (636 aa)    
Predicted Functional Partners:
C900_03690
NADH-ubiquinone oxidoreductase chain M.
    
 
 0.979
C900_03162
Hypothetical protein.
   
  0.897
secY
Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.738
C900_00729
Sulfate transporter.
    
   0.683
C900_01948
Sulfate permease.
    
   0.683
C900_02676
Sulfate transporter.
    
   0.683
C900_03720
Sulfate permease.
    
   0.683
C900_04113
Sulfate transporter.
    
   0.683
C900_04409
ATP-dependent protease La domain protein.
    
  0.683
C900_01348
Sulfur carrier protein adenylyltransferase ThiF.
    
 0.671
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.