STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_04820Transcriptional regulator, TetR family. (204 aa)    
Predicted Functional Partners:
C900_04821
Phenylacetate-CoA oxygenase, PaaG subunit.
 
     0.836
C900_04824
Phenylacetate-CoA oxygenase, PaaJ subunit.
 
     0.724
C900_04823
Phenylacetate-CoA oxygenase, PaaI subunit.
 
     0.717
C900_04819
Hypothetical protein.
       0.563
C900_04822
Phenylacetate-CoA oxygenase, PaaH subunit.
 
     0.538
C900_03343
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
 
     0.493
C900_04685
Two-component hybrid sensor and regulator.
    
 
 0.422
C900_00575
Malonyl CoA-acyl carrier protein transacylase.
    
 0.407
C900_05610
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.403
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.