STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05100Hypothetical protein. (413 aa)    
Predicted Functional Partners:
C900_05099
Hypothetical protein.
 
     0.950
C900_05102
ABC transporter ATP-binding protein.
 
   0.944
C900_05101
ABC transporter ATP-binding protein.
 
   0.926
C900_05098
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
       0.525
C900_05104
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family.
 
     0.523
C900_02164
ABC transporter ATP-binding protein.
 
   0.509
C900_04091
Putative ABC transport system, ATP-binding protein.
 
   0.509
C900_05253
ABC transporter, ATP-binding protein.
 
   0.509
C900_05097
SAM-dependent methyltransferase.
       0.498
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
   0.492
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.