STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05346Mg(2+) transport ATPase protein C. (157 aa)    
Predicted Functional Partners:
C900_05345
PA-phosphatase related phosphoesterase.
       0.773
C900_00991
Cation-transporting ATPase.
  
 
 0.529
C900_01908
Cation-transporting ATPase PacL.
  
 
 0.529
C900_01945
Cation-transporting ATPase.
  
 
 0.529
C900_04320
Cation-transporting ATPase.
  
 
 0.529
C900_05343
Succinate-semialdehyde dehydrogenase.
  
    0.485
C900_05344
PAP2 superfamily protein.
       0.480
atpB
ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.439
C900_04685
Two-component hybrid sensor and regulator.
  
 
 0.425
C900_05338
Type IV fimbriae expression regulatory protein PilR.
   
   0.421
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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