STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05414UDP-glucose 4-epimerase. (694 aa)    
Predicted Functional Partners:
C900_05413
Threonine dehydrogenase.
 
 
  0.952
C900_05411
Glycosyltransferase.
 
    0.950
C900_05412
Putative oxidoreductase protein.
 
 
  0.946
C900_05410
Glycosyltransferase.
 
    0.940
C900_05408
Hypothetical protein.
    0.934
C900_05409
Hypothetical protein.
 
    0.934
C900_00322
Hypothetical protein.
  
 0.895
C900_05407
Methyltransferase type 11.
 
     0.885
C900_01919
Malonyl CoA-acyl carrier protein transacylase.
  
 0.879
C900_01925
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
  
 0.879
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.