STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05660Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (415 aa)    
Predicted Functional Partners:
C900_05661
Iron-sulfur cluster assembly protein SufD.
 
 0.997
C900_05662
Iron-sulfur cluster assembly ATPase protein SufC.
  
 0.997
C900_05664
Iron-sulfur cluster assembly protein SufB.
 
 0.993
C900_05659
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
 
 0.982
C900_05658
PaaD-like protein.
  
 0.978
C900_00782
Thioredoxin reductase.
   
 
  0.879
C900_04237
Thioredoxin reductase.
   
 
  0.879
C900_03665
Endonuclease/exonuclease/phosphatase family protein.
    
   0.873
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.781
C900_00829
Thioredoxin reductase.
   
 
 0.700
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.