STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05706Hypothetical protein. (836 aa)    
Predicted Functional Partners:
C900_05576
Hypothetical protein.
    
 0.943
C900_04007
Hypothetical protein.
    
  0.691
C900_05705
Hypothetical protein.
       0.664
C900_05704
Hypothetical protein.
       0.585
C900_04356
TonB.
 
 
   0.536
C900_05282
Hypothetical protein.
    
   0.534
C900_00211
Hypothetical protein.
  
 
   0.524
C900_01005
TonB-dependent receptor.
 
 
   0.505
C900_05685
Hypothetical protein.
  
 
   0.499
C900_05870
Putative outer membrane protein.
  
 
  0.496
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.