STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341085_04210Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000341085_04209
Unannotated protein.
 
  
  0.805
GCA_000341085_04738
Unannotated protein.
 
  
 0.739
GCA_000341085_04211
Unannotated protein.
    
  0.696
GCA_000341085_04212
Unannotated protein.
       0.689
GCA_000341085_04736
Unannotated protein.
    
 0.631
GCA_000341085_02737
Unannotated protein.
  
 
  0.630
GCA_000341085_02317
Unannotated protein.
     
 0.600
GCA_000341085_00023
Unannotated protein.
    
  0.576
GCA_000341085_00750
Unannotated protein.
    
  0.576
GCA_000341085_00893
Unannotated protein.
    
  0.576
Your Current Organism:
Nocardiopsis ganjiahuensis
NCBI taxonomy Id: 1237500
Other names: N. ganjiahuensis DSM 45031, Nocardiopsis ganjiahuensis DSM 45031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.