STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGLO_11966Glycosyl hydrolase family 16. (380 aa)    
Predicted Functional Partners:
CGLO_13463
Uncharacterized protein.
    
 0.701
CGLO_16711
Histone acetyltransferase subunit 3.
    
 0.598
CGLO_00426
TFIID_20kDa domain-containing protein.
    
  0.587
CGLO_13606
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.584
CGLO_00557
TATA box binding protein associated factor.
    
 0.569
CGLO_06631
Uncharacterized protein.
    
  0.557
CGLO_01294
Spt3.
    
  0.557
CGLO_17331
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
  0.545
CGLO_15984
Uncharacterized protein.
    
  0.545
CGLO_04211
SUN domain-containing protein.
    
 0.543
Your Current Organism:
Colletotrichum gloeosporioides
NCBI taxonomy Id: 1237896
Other names: C. gloeosporioides Cg-14, Colletotrichum gloeosporioides Cg-14
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