node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMA41164.1 | AMA42012.1 | AWJ11_01150 | AWJ11_06230 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.604 |
AMA41164.1 | polA | AWJ11_01150 | AWJ11_15710 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.439 |
AMA41164.1 | priB | AWJ11_01150 | AWJ11_08265 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.722 |
AMA41164.1 | recJ | AWJ11_01150 | AWJ11_01715 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.564 |
AMA41255.1 | recJ | AWJ11_01710 | AWJ11_01715 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
AMA41855.1 | mutL | AWJ11_05285 | AWJ11_06605 | Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the XseA family. | Endonuclease/exonuclease/phosphatase; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.457 |
AMA41855.1 | polA | AWJ11_05285 | AWJ11_15710 | Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the XseA family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.596 |
AMA41855.1 | recJ | AWJ11_05285 | AWJ11_01715 | Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the XseA family. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
AMA42012.1 | AMA41164.1 | AWJ11_06230 | AWJ11_01150 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
AMA42012.1 | mutL | AWJ11_06230 | AWJ11_06605 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Endonuclease/exonuclease/phosphatase; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.947 |
AMA42012.1 | polA | AWJ11_06230 | AWJ11_15710 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.982 |
AMA42012.1 | priB | AWJ11_06230 | AWJ11_08265 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.867 |
AMA42012.1 | recG | AWJ11_06230 | AWJ11_10950 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
AMA42012.1 | recJ | AWJ11_06230 | AWJ11_01715 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.645 |
AMA42012.1 | topA | AWJ11_06230 | AWJ11_15575 | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.942 |
greA | recG | AWJ11_14345 | AWJ11_10950 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
greA | recJ | AWJ11_14345 | AWJ11_01715 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.530 |
greA | topA | AWJ11_14345 | AWJ11_15575 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.463 |
mutL | AMA41855.1 | AWJ11_06605 | AWJ11_05285 | Endonuclease/exonuclease/phosphatase; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the XseA family. | 0.457 |
mutL | AMA42012.1 | AWJ11_06605 | AWJ11_06230 | Endonuclease/exonuclease/phosphatase; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 5'-3' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.947 |