Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMA41097.1 | AMA42282.1 | AWJ11_00790 | AWJ11_07795 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| AMA41097.1 | AMA42663.1 | AWJ11_00790 | AWJ11_10020 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.932 |
| AMA41097.1 | AMA42981.1 | AWJ11_00790 | AWJ11_11860 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.800 |
| AMA41097.1 | AMA43308.1 | AWJ11_00790 | AWJ11_13710 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
| AMA41097.1 | AMA43501.1 | AWJ11_00790 | AWJ11_14800 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic amino acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.912 |
| AMA41097.1 | AMA43502.1 | AWJ11_00790 | AWJ11_14805 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
| AMA41097.1 | AMA43504.1 | AWJ11_00790 | AWJ11_14815 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| AMA41097.1 | AMA43532.1 | AWJ11_00790 | AWJ11_14975 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | 0.900 |
| AMA41097.1 | AWJ11_12665 | AWJ11_00790 | AWJ11_12665 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AMA41097.1 | hisC | AWJ11_00790 | AWJ11_14820 | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.906 |
| AMA42282.1 | AMA41097.1 | AWJ11_07795 | AWJ11_00790 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| AMA42282.1 | AMA42663.1 | AWJ11_07795 | AWJ11_10020 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.439 |
| AMA42282.1 | AMA43308.1 | AWJ11_07795 | AWJ11_13710 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |
| AMA42282.1 | AMA43501.1 | AWJ11_07795 | AWJ11_14800 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic amino acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.744 |
| AMA42282.1 | AMA43502.1 | AWJ11_07795 | AWJ11_14805 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AMA42282.1 | AMA43504.1 | AWJ11_07795 | AWJ11_14815 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AMA42282.1 | hisC | AWJ11_07795 | AWJ11_14820 | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.418 |
| AMA42663.1 | AMA41097.1 | AWJ11_10020 | AWJ11_00790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| AMA42663.1 | AMA42282.1 | AWJ11_10020 | AWJ11_07795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
| AMA42663.1 | AMA42981.1 | AWJ11_10020 | AWJ11_11860 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.887 |
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